Burden of influenza, respiratory syncytial virus, and other respiratory viruses and the completeness of respiratory viral identification among respiratory inpatients, Canada, 2003-2014.
Identifieur interne : 000064 ( Main/Exploration ); précédent : 000063; suivant : 000065Burden of influenza, respiratory syncytial virus, and other respiratory viruses and the completeness of respiratory viral identification among respiratory inpatients, Canada, 2003-2014.
Auteurs : Dena L. Schanzer [Canada] ; Myriam Saboui [Canada] ; Liza Lee [Canada] ; Andrea Nwosu [Canada] ; Christina Bancej [Canada]Source :
- Influenza and other respiratory viruses [ 1750-2659 ] ; 2018.
Descripteurs français
- KwdFr :
- Adolescent, Adulte, Adulte d'âge moyen, Analyse de régression, Canada, Coût de la maladie, Enfant, Enfant d'âge préscolaire, Grippe humaine (épidémiologie), Hospitalisation, Humains, Infections à virus respiratoire syncytial (épidémiologie), Jeune adulte, Nourrisson, Patients hospitalisés, Sujet âgé, Virus respiratoires syncytiaux, Études rétrospectives.
- MESH :
- épidémiologie : Grippe humaine, Infections à virus respiratoire syncytial.
- Adolescent, Adulte, Adulte d'âge moyen, Analyse de régression, Canada, Coût de la maladie, Enfant, Enfant d'âge préscolaire, Hospitalisation, Humains, Jeune adulte, Nourrisson, Patients hospitalisés, Sujet âgé, Virus respiratoires syncytiaux, Études rétrospectives.
- Wicri :
- geographic : Canada.
English descriptors
- KwdEn :
- Adolescent, Adult, Aged, Canada, Child, Child, Preschool, Cost of Illness, Hospitalization, Humans, Infant, Influenza, Human (epidemiology), Inpatients, Middle Aged, Regression Analysis, Respiratory Syncytial Virus Infections (epidemiology), Respiratory Syncytial Viruses, Retrospective Studies, Young Adult.
- MESH :
- geographic : Canada.
- epidemiology : Influenza, Human, Respiratory Syncytial Virus Infections.
- Adolescent, Adult, Aged, Child, Child, Preschool, Cost of Illness, Hospitalization, Humans, Infant, Inpatients, Middle Aged, Regression Analysis, Respiratory Syncytial Viruses, Retrospective Studies, Young Adult.
Abstract
BACKGROUND
A regression-based study design has commonly been used to estimate the influenza burden; however, these estimates are not timely and many countries lack sufficient virological data. Alternative approaches that would permit a timelier assessment of the burden, including a sentinel surveillance approach recommended by the World Health Organization (WHO), have been proposed. We aimed to estimate the hospitalization burden attributable to influenza, respiratory syncytial virus (RSV), and other respiratory viruses (ORV) and to assess both the completeness of viral identification among respiratory inpatients in Canada and the implications of adopting other approaches.
METHODS
Respiratory inpatient records were extracted from the Canadian Discharge Abstract Database from 2003 to 2014. A regression model was used to estimate excess respiratory hospitalizations attributable to influenza, RSV, and ORV by age group and diagnostic category and compare these estimates with the number with a respiratory viral identification.
RESULTS
An estimated 33 (95% CI: 29, 38), 27 (95% CI: 22, 33), and 27 (95% CI: 18, 36) hospitalizations per 100 000 population per year were attributed to influenza, RSV, and ORV, respectively. An influenza virus was identified in an estimated 78% (95% CI: 75, 81) and 17% (95% CI: 15, 21) of respiratory hospitalizations attributed to influenza for children and adults, respectively, and 75% of influenza-attributed hospitalizations had an ARI diagnosis.
CONCLUSIONS
Hospitalization rates with respiratory viral identification still underestimate the burden. Approaches based on acute respiratory case definitions will likely underestimate the burden as well, although each proposed method should be compared with regression-based estimates of influenza-attributed burden as a way of assessing their validity.
DOI: 10.1111/irv.12497
PubMed: 29243369
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Schanzer</name><affiliation wicri:level="1"><nlm:affiliation>Infectious Disease Prevention and Control Branch, Public Health Agency of Canada, Ottawa, ON, Canada.</nlm:affiliation><country xml:lang="fr">Canada</country><wicri:regionArea>Infectious Disease Prevention and Control Branch, Public Health Agency of Canada, Ottawa, ON</wicri:regionArea><wicri:noRegion>ON</wicri:noRegion></affiliation></author><author><name sortKey="Saboui, Myriam" sort="Saboui, Myriam" uniqKey="Saboui M" first="Myriam" last="Saboui">Myriam Saboui</name><affiliation wicri:level="1"><nlm:affiliation>Infectious Disease Prevention and Control Branch, Public Health Agency of Canada, Ottawa, ON, Canada.</nlm:affiliation><country xml:lang="fr">Canada</country><wicri:regionArea>Infectious Disease Prevention and Control Branch, Public Health Agency of Canada, Ottawa, ON</wicri:regionArea><wicri:noRegion>ON</wicri:noRegion></affiliation></author><author><name sortKey="Lee, Liza" sort="Lee, Liza" uniqKey="Lee L" first="Liza" last="Lee">Liza Lee</name><affiliation wicri:level="1"><nlm:affiliation>Infectious Disease Prevention and Control Branch, Public Health Agency of Canada, Ottawa, ON, Canada.</nlm:affiliation><country xml:lang="fr">Canada</country><wicri:regionArea>Infectious Disease Prevention and Control Branch, Public Health Agency of Canada, Ottawa, ON</wicri:regionArea><wicri:noRegion>ON</wicri:noRegion></affiliation></author><author><name sortKey="Nwosu, Andrea" sort="Nwosu, Andrea" uniqKey="Nwosu A" first="Andrea" last="Nwosu">Andrea Nwosu</name><affiliation wicri:level="1"><nlm:affiliation>Infectious Disease Prevention and Control Branch, Public Health Agency of Canada, Ottawa, ON, Canada.</nlm:affiliation><country xml:lang="fr">Canada</country><wicri:regionArea>Infectious Disease Prevention and Control Branch, Public Health Agency of Canada, Ottawa, ON</wicri:regionArea><wicri:noRegion>ON</wicri:noRegion></affiliation></author><author><name sortKey="Bancej, Christina" sort="Bancej, Christina" uniqKey="Bancej C" first="Christina" last="Bancej">Christina Bancej</name><affiliation wicri:level="1"><nlm:affiliation>Infectious Disease Prevention and Control Branch, Public Health Agency of Canada, Ottawa, ON, Canada.</nlm:affiliation><country xml:lang="fr">Canada</country><wicri:regionArea>Infectious Disease Prevention and Control Branch, Public Health Agency of Canada, Ottawa, ON</wicri:regionArea><wicri:noRegion>ON</wicri:noRegion></affiliation></author></analytic><series><title level="j">Influenza and other respiratory viruses</title><idno type="eISSN">1750-2659</idno><imprint><date when="2018" type="published">2018</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Adolescent</term><term>Adult</term><term>Aged</term><term>Canada</term><term>Child</term><term>Child, Preschool</term><term>Cost of Illness</term><term>Hospitalization</term><term>Humans</term><term>Infant</term><term>Influenza, Human (epidemiology)</term><term>Inpatients</term><term>Middle Aged</term><term>Regression Analysis</term><term>Respiratory Syncytial Virus Infections (epidemiology)</term><term>Respiratory Syncytial Viruses</term><term>Retrospective Studies</term><term>Young Adult</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Adolescent</term><term>Adulte</term><term>Adulte d'âge moyen</term><term>Analyse de régression</term><term>Canada</term><term>Coût de la maladie</term><term>Enfant</term><term>Enfant d'âge préscolaire</term><term>Grippe humaine (épidémiologie)</term><term>Hospitalisation</term><term>Humains</term><term>Infections à virus respiratoire syncytial (épidémiologie)</term><term>Jeune adulte</term><term>Nourrisson</term><term>Patients hospitalisés</term><term>Sujet âgé</term><term>Virus respiratoires syncytiaux</term><term>Études rétrospectives</term></keywords><keywords scheme="MESH" type="geographic" xml:lang="en"><term>Canada</term></keywords><keywords scheme="MESH" qualifier="epidemiology" xml:lang="en"><term>Influenza, Human</term><term>Respiratory Syncytial Virus Infections</term></keywords><keywords scheme="MESH" qualifier="épidémiologie" xml:lang="fr"><term>Grippe humaine</term><term>Infections à virus respiratoire syncytial</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Adolescent</term><term>Adult</term><term>Aged</term><term>Child</term><term>Child, Preschool</term><term>Cost of Illness</term><term>Hospitalization</term><term>Humans</term><term>Infant</term><term>Inpatients</term><term>Middle Aged</term><term>Regression Analysis</term><term>Respiratory Syncytial Viruses</term><term>Retrospective Studies</term><term>Young Adult</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Adolescent</term><term>Adulte</term><term>Adulte d'âge moyen</term><term>Analyse de régression</term><term>Canada</term><term>Coût de la maladie</term><term>Enfant</term><term>Enfant d'âge préscolaire</term><term>Hospitalisation</term><term>Humains</term><term>Jeune adulte</term><term>Nourrisson</term><term>Patients hospitalisés</term><term>Sujet âgé</term><term>Virus respiratoires syncytiaux</term><term>Études rétrospectives</term></keywords><keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>Canada</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p><b>BACKGROUND</b></p><p>A regression-based study design has commonly been used to estimate the influenza burden; however, these estimates are not timely and many countries lack sufficient virological data. Alternative approaches that would permit a timelier assessment of the burden, including a sentinel surveillance approach recommended by the World Health Organization (WHO), have been proposed. We aimed to estimate the hospitalization burden attributable to influenza, respiratory syncytial virus (RSV), and other respiratory viruses (ORV) and to assess both the completeness of viral identification among respiratory inpatients in Canada and the implications of adopting other approaches.</p></div><div type="abstract" xml:lang="en"><p><b>METHODS</b></p><p>Respiratory inpatient records were extracted from the Canadian Discharge Abstract Database from 2003 to 2014. A regression model was used to estimate excess respiratory hospitalizations attributable to influenza, RSV, and ORV by age group and diagnostic category and compare these estimates with the number with a respiratory viral identification.</p></div><div type="abstract" xml:lang="en"><p><b>RESULTS</b></p><p>An estimated 33 (95% CI: 29, 38), 27 (95% CI: 22, 33), and 27 (95% CI: 18, 36) hospitalizations per 100 000 population per year were attributed to influenza, RSV, and ORV, respectively. An influenza virus was identified in an estimated 78% (95% CI: 75, 81) and 17% (95% CI: 15, 21) of respiratory hospitalizations attributed to influenza for children and adults, respectively, and 75% of influenza-attributed hospitalizations had an ARI diagnosis.</p></div><div type="abstract" xml:lang="en"><p><b>CONCLUSIONS</b></p><p>Hospitalization rates with respiratory viral identification still underestimate the burden. Approaches based on acute respiratory case definitions will likely underestimate the burden as well, although each proposed method should be compared with regression-based estimates of influenza-attributed burden as a way of assessing their validity.</p></div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">29243369</PMID><DateCompleted><Year>2019</Year><Month>01</Month><Day>04</Day></DateCompleted><DateRevised><Year>2020</Year><Month>04</Month><Day>20</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1750-2659</ISSN><JournalIssue CitedMedium="Internet"><Volume>12</Volume><Issue>1</Issue><PubDate><Year>2018</Year><Month>01</Month></PubDate></JournalIssue><Title>Influenza and other respiratory viruses</Title><ISOAbbreviation>Influenza Other Respir Viruses</ISOAbbreviation></Journal><ArticleTitle>Burden of influenza, respiratory syncytial virus, and other respiratory viruses and the completeness of respiratory viral identification among respiratory inpatients, Canada, 2003-2014.</ArticleTitle><Pagination><MedlinePgn>113-121</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1111/irv.12497</ELocationID><Abstract><AbstractText Label="BACKGROUND">A regression-based study design has commonly been used to estimate the influenza burden; however, these estimates are not timely and many countries lack sufficient virological data. Alternative approaches that would permit a timelier assessment of the burden, including a sentinel surveillance approach recommended by the World Health Organization (WHO), have been proposed. We aimed to estimate the hospitalization burden attributable to influenza, respiratory syncytial virus (RSV), and other respiratory viruses (ORV) and to assess both the completeness of viral identification among respiratory inpatients in Canada and the implications of adopting other approaches.</AbstractText><AbstractText Label="METHODS">Respiratory inpatient records were extracted from the Canadian Discharge Abstract Database from 2003 to 2014. A regression model was used to estimate excess respiratory hospitalizations attributable to influenza, RSV, and ORV by age group and diagnostic category and compare these estimates with the number with a respiratory viral identification.</AbstractText><AbstractText Label="RESULTS">An estimated 33 (95% CI: 29, 38), 27 (95% CI: 22, 33), and 27 (95% CI: 18, 36) hospitalizations per 100 000 population per year were attributed to influenza, RSV, and ORV, respectively. An influenza virus was identified in an estimated 78% (95% CI: 75, 81) and 17% (95% CI: 15, 21) of respiratory hospitalizations attributed to influenza for children and adults, respectively, and 75% of influenza-attributed hospitalizations had an ARI diagnosis.</AbstractText><AbstractText Label="CONCLUSIONS">Hospitalization rates with respiratory viral identification still underestimate the burden. Approaches based on acute respiratory case definitions will likely underestimate the burden as well, although each proposed method should be compared with regression-based estimates of influenza-attributed burden as a way of assessing their validity.</AbstractText><CopyrightInformation>© 2017 The Authors. Influenza and Other Respiratory Viruses. Published by John Wiley & Sons Ltd.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Schanzer</LastName><ForeName>Dena L</ForeName><Initials>DL</Initials><Identifier Source="ORCID">0000-0001-7093-4309</Identifier><AffiliationInfo><Affiliation>Infectious Disease Prevention and Control Branch, Public Health Agency of Canada, Ottawa, ON, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Saboui</LastName><ForeName>Myriam</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Infectious Disease Prevention and Control Branch, Public Health Agency of Canada, Ottawa, ON, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Lee</LastName><ForeName>Liza</ForeName><Initials>L</Initials><AffiliationInfo><Affiliation>Infectious Disease Prevention and Control Branch, Public Health Agency of Canada, Ottawa, ON, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Nwosu</LastName><ForeName>Andrea</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Infectious Disease Prevention and Control Branch, Public Health Agency of Canada, Ottawa, ON, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bancej</LastName><ForeName>Christina</ForeName><Initials>C</Initials><AffiliationInfo><Affiliation>Infectious Disease Prevention and Control Branch, Public Health Agency of Canada, Ottawa, ON, Canada.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2017</Year><Month>12</Month><Day>15</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Influenza Other Respir Viruses</MedlineTA><NlmUniqueID>101304007</NlmUniqueID><ISSNLinking>1750-2640</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000293" MajorTopicYN="N">Adolescent</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D000328" MajorTopicYN="N">Adult</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D000368" MajorTopicYN="N">Aged</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D002170" MajorTopicYN="N" Type="Geographic">Canada</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D002648" MajorTopicYN="N">Child</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D002675" MajorTopicYN="N">Child, Preschool</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017281" MajorTopicYN="N">Cost of Illness</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D006760" MajorTopicYN="N">Hospitalization</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D006801" MajorTopicYN="N">Humans</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D007223" MajorTopicYN="N">Infant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D007251" MajorTopicYN="N">Influenza, Human</DescriptorName><QualifierName UI="Q000453" MajorTopicYN="Y">epidemiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D007297" MajorTopicYN="N">Inpatients</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D008875" MajorTopicYN="N">Middle Aged</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012044" MajorTopicYN="N">Regression Analysis</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018357" MajorTopicYN="N">Respiratory Syncytial Virus Infections</DescriptorName><QualifierName UI="Q000453" MajorTopicYN="Y">epidemiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012136" MajorTopicYN="Y">Respiratory Syncytial Viruses</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012189" MajorTopicYN="N">Retrospective Studies</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D055815" MajorTopicYN="N">Young Adult</DescriptorName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="Y">completeness of case ascertainment</Keyword><Keyword MajorTopicYN="Y">disease burden</Keyword><Keyword MajorTopicYN="Y">influenza-attributed hospitalization rates</Keyword><Keyword MajorTopicYN="Y">respiratory syncytial virus</Keyword><Keyword MajorTopicYN="Y">respiratory viral identification</Keyword><Keyword MajorTopicYN="Y">severe acute respiratory infections</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="accepted"><Year>2017</Year><Month>09</Month><Day>09</Day></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2017</Year><Month>12</Month><Day>16</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2019</Year><Month>1</Month><Day>5</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2017</Year><Month>12</Month><Day>16</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">29243369</ArticleId><ArticleId IdType="doi">10.1111/irv.12497</ArticleId><ArticleId IdType="pmc">PMC5818333</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>PLoS Med. 2013 Nov;10(11):e1001558</Citation><ArticleIdList><ArticleId IdType="pubmed">24302890</ArticleId></ArticleIdList></Reference><Reference><Citation>J Pediatric Infect Dis Soc. 2017 Sep 1;6(3):297-300</Citation><ArticleIdList><ArticleId IdType="pubmed">27496537</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Infect Dis. 2011 Apr 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27;8(11):e80481</Citation><ArticleIdList><ArticleId IdType="pubmed">24312225</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>Canada</li></country></list><tree><country name="Canada"><noRegion><name sortKey="Schanzer, Dena L" sort="Schanzer, Dena L" uniqKey="Schanzer D" first="Dena L" last="Schanzer">Dena L. Schanzer</name></noRegion><name sortKey="Bancej, Christina" sort="Bancej, Christina" uniqKey="Bancej C" first="Christina" last="Bancej">Christina Bancej</name><name sortKey="Lee, Liza" sort="Lee, Liza" uniqKey="Lee L" first="Liza" last="Lee">Liza Lee</name><name sortKey="Nwosu, Andrea" sort="Nwosu, Andrea" uniqKey="Nwosu A" first="Andrea" last="Nwosu">Andrea Nwosu</name><name sortKey="Saboui, Myriam" sort="Saboui, Myriam" uniqKey="Saboui M" first="Myriam" last="Saboui">Myriam Saboui</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a GrippeCanadaV3
| This area was generated with Dilib version V0.6.35. |  |